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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "DamageDetective" in publications use:'
type: software
license: AGPL-3.0-or-later
title: 'DamageDetective: Detecting Damaged Cells in Single-Cell RNA Sequencing Data'
version: 2.0.15
doi: 10.32614/CRAN.package.DamageDetective
abstract: Detects and filters damaged cells in single-cell RNA sequencing (scRNA-seq)
  data using a novel approach inspired by 'DoubletFinder'. Damage is assessed by measuring
  how much each cell deviates from an artificially damaged version of itself, simulated
  through the probabilistic loss of cytoplasmic RNA. The method outputs a damage score
  ranging from 0 (viable, intact cell) to 1 (broken, non-viable cell), providing an
  intuitive scale for filtering that is standardised across cell types, sample origin,
  and experimental design.
authors:
- family-names: Henning
  given-names: Alicen
  email: alicen.jhb@gmail.com
  orcid: https://orcid.org/0009-0004-0535-1624
repository: https://alicenjoyhenning.r-universe.dev
repository-code: https://github.com/alicenjoyhenning/DamageDetective
commit: 3d21be2175fcb29e9f68f301640e8386bf8a1c5c
url: https://alicenjoyhenning.github.io/DamageDetective/
date-released: '2025-10-19'
contact:
- family-names: Henning
  given-names: Alicen
  email: alicen.jhb@gmail.com
  orcid: https://orcid.org/0009-0004-0535-1624